CDS

Accession Number TCMCG007C59186
gbkey CDS
Protein Id XP_009118204.2
Location complement(join(42860903..42860965,42861057..42861210,42861288..42861403,42861476..42861614,42861686..42861957,42862037..42862392,42862471..42862973,42863047..42863112,42863204..42863269,42863357..42863428,42863499..42863570,42863655..42863726,42863809..42863874,42863964..42864035,42867581..42867638,42867973..42868063))
Gene LOC103843254
GeneID 103843254
Organism Brassica rapa

Protein

Length 745aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009119956.3
Definition protein STRUBBELIG isoform X3 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category T
Description Leucine rich repeat
KEGG_TC -
KEGG_Module M00686        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01001        [VIEW IN KEGG]
KEGG_ko ko:K04733        [VIEW IN KEGG]
EC 2.7.11.1        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko04010        [VIEW IN KEGG]
ko04064        [VIEW IN KEGG]
ko04620        [VIEW IN KEGG]
ko04621        [VIEW IN KEGG]
ko04624        [VIEW IN KEGG]
ko04722        [VIEW IN KEGG]
ko05133        [VIEW IN KEGG]
ko05140        [VIEW IN KEGG]
ko05142        [VIEW IN KEGG]
ko05145        [VIEW IN KEGG]
ko05152        [VIEW IN KEGG]
ko05162        [VIEW IN KEGG]
ko05164        [VIEW IN KEGG]
map04010        [VIEW IN KEGG]
map04064        [VIEW IN KEGG]
map04620        [VIEW IN KEGG]
map04621        [VIEW IN KEGG]
map04624        [VIEW IN KEGG]
map04722        [VIEW IN KEGG]
map05133        [VIEW IN KEGG]
map05140        [VIEW IN KEGG]
map05142        [VIEW IN KEGG]
map05145        [VIEW IN KEGG]
map05152        [VIEW IN KEGG]
map05162        [VIEW IN KEGG]
map05164        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000902        [VIEW IN EMBL-EBI]
GO:0003002        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004672        [VIEW IN EMBL-EBI]
GO:0004674        [VIEW IN EMBL-EBI]
GO:0004675        [VIEW IN EMBL-EBI]
GO:0004888        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006468        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0007166        [VIEW IN EMBL-EBI]
GO:0007167        [VIEW IN EMBL-EBI]
GO:0007178        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007389        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009793        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009908        [VIEW IN EMBL-EBI]
GO:0009933        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010014        [VIEW IN EMBL-EBI]
GO:0010015        [VIEW IN EMBL-EBI]
GO:0010051        [VIEW IN EMBL-EBI]
GO:0010058        [VIEW IN EMBL-EBI]
GO:0010059        [VIEW IN EMBL-EBI]
GO:0010061        [VIEW IN EMBL-EBI]
GO:0010063        [VIEW IN EMBL-EBI]
GO:0010071        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0010305        [VIEW IN EMBL-EBI]
GO:0010453        [VIEW IN EMBL-EBI]
GO:0010455        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016301        [VIEW IN EMBL-EBI]
GO:0016310        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016773        [VIEW IN EMBL-EBI]
GO:0019199        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022603        [VIEW IN EMBL-EBI]
GO:0022622        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032989        [VIEW IN EMBL-EBI]
GO:0035670        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0038023        [VIEW IN EMBL-EBI]
GO:0042127        [VIEW IN EMBL-EBI]
GO:0042659        [VIEW IN EMBL-EBI]
GO:0042660        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045595        [VIEW IN EMBL-EBI]
GO:0045597        [VIEW IN EMBL-EBI]
GO:0048316        [VIEW IN EMBL-EBI]
GO:0048364        [VIEW IN EMBL-EBI]
GO:0048366        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048437        [VIEW IN EMBL-EBI]
GO:0048438        [VIEW IN EMBL-EBI]
GO:0048440        [VIEW IN EMBL-EBI]
GO:0048467        [VIEW IN EMBL-EBI]
GO:0048481        [VIEW IN EMBL-EBI]
GO:0048507        [VIEW IN EMBL-EBI]
GO:0048508        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048532        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048827        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051094        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051240        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0060089        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0090421        [VIEW IN EMBL-EBI]
GO:0090567        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1903888        [VIEW IN EMBL-EBI]
GO:1903890        [VIEW IN EMBL-EBI]
GO:1905392        [VIEW IN EMBL-EBI]
GO:1905421        [VIEW IN EMBL-EBI]
GO:1905423        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]
GO:2000067        [VIEW IN EMBL-EBI]
GO:2000280        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGCTTTACAAGAAGACAAGTGTTCTTTGTTCTCTCTCTTTTAGCTTTGACAATGCCGTTCTCAGCTGGAGTCACCAATCTACGAGATGACCCTTGTGTAGAAAAGTGGCAAGGTGTGGTCTGTGATTCCTCAAACATCACAGAAATAAGGATACCTGGCATGAAGGTGGGTGGAGGCTTAAGTGATACTTTGGCTGATTTTTCATCAATCCAAGTGATGGACTTCAGTAACAATCATATCTCAGGGACAATTCCACAGGCTTTGCCTTCTACCATCCGTAACCTCTCTCTCTCTAGCAACCGCTTCACTGGGAACATTCCCTTTACATTGTCCTTTCTATCCGACTTGTCAGAGCTGTCATTGGGAAACAATCTTTTATCAGGAGAGATACCAGATTACTTTCAGCAGTTATCAAAGCTGACAAAACTGGACTTATCCTCTAACGTACTGGAGGGGCGTTTACCTCCCTCCATGGGAGACTTAGCGGCTCTCAAGATCCTGTATCTACAGGACAACAAGCTCATCGGAACACTTGATGTTATAGAGGATCTTTTCTTGACCGATTTGAATGTAGCAAACAACTTATTCTCAGGACCTATACCTCCAAATCTATTAAAAGTTCCGCATTTCCAAAAAGATGGAACTCCATTCAACACATCAATTATAACACCGCCTCCACCTGCTGTTGTTCCTCCTCCTCCTACTACTACTACTCACCGTTCTCCTCCTCCTGTTACTCATATCCCTCCTGGTTCCACTGTTCCCCCCGCTCCGTTTGCTCCTTTTGTTCCACTCCAACTAACACCACCACTACCATCGCCACCTTTAGTTTGGTCACCACCTTCTGATAATGGAGGAGGAAGTGATCCCTGGAACTCTGTCTCAGGGCAACCTACCTTGCAAATCTCACCTCCTTCAGGTTCAGGGTCAGGAAAGTTCTGGTCCACTCAGAGAATCATTCTAGTCATCTGCTCAGTAGCCGTAATAGTTCTTGTATCCGGGCTGTGTGTTACACTTTGGAGATGTTACAGAAACAAGAAGTATAACCGTTATATCCCTGAAGCTCGTAAAGATTACCAACGACCATACTTTAACAAGCCTCCATCTCAACCAACCACCCCCTTTATGGCAAAAGTTTCTAGGGAGCCTATGGTTAAGCCATACGATGGATATGGAGCCGGAGACAGATTATACGGCTACCCTACGCCACCAAGGGCTGAAGAGAGCCGGAGAGCGATGCCACCTACTTCATATTACAATGTTAATGTCACACAAAAACCGCTGCAACAACCACCGAGGCGTTTCCAGTCTAATGATGCTGCTGCTACCAAGAGAACTGCTCATTTTCCTCCTGGCTTGAATACTCAATCTTCCGCTACAGTTTTCACTGTTGCTTCACTTCAGCAATACACAAACAGCTTCTCAGAAGAGCATATCATCGGTGAAGGGTCGCTTGGTAATGTATACAAAGCCGTGTTTCCTCATGGAAAGTTTCTTGCGGTGAGGAAGCTGAGCAATACAATCAACAATACGCAGAGCGACGGTGACTTCCTCAATCTAGTCTCAAACGTTTTGAAACTGAAACGAGGGAACATACTTGAGTTTCTTGGTTATTGTAATGAGTATGGTCAAAGGCTGCTTGTGTATGAGTACTGTCCTAATGGTTCGCTTCAAGACGCATTACATTTGGACCGCAAATTGAACAAGAAGCTCACTTGGAATGTGCGTATGAATATCGCCTTAGGAGCTGCCAAGGCACTTCAGTTTCTTCATGAGGTGTGTCAACCACCTGTTGTACACCAGAACTTCAAGTCTTCCAAGGTTCTACTTGATGGAAAGCTCTCAGTACGCGTTGCAGACAGCGGTTTAGCTTATATGTTACCACCACGTCCAACGAGCCAGATGGCGGGTTATGCTGCTCCTGAGATTGAGTATGGAAGCTACACTTGTCAAAGCGATGTGTATAGCCTTGGGGTTGTGATGTTAGAACTGCTAACTGGAAGCAGACCATTTGACAGGACAAGGCGGAGGGATCAGACACTAGCTCAGTGGGCTATACCACGGCTTCATGACATAGATGCGTTGACAAGAATGGCTGATCCGTCGTTACATGGAGCATATTCAGTGAAATCTTTGTCACGTTTTGCAGATATTATATCACGTTCTCTCCAGATGGAACCAGGATTCAGACCGCCTGTATCAGAAATTGTCCAAGATCTTCAACGTATGATCTAA
Protein:  
MSFTRRQVFFVLSLLALTMPFSAGVTNLRDDPCVEKWQGVVCDSSNITEIRIPGMKVGGGLSDTLADFSSIQVMDFSNNHISGTIPQALPSTIRNLSLSSNRFTGNIPFTLSFLSDLSELSLGNNLLSGEIPDYFQQLSKLTKLDLSSNVLEGRLPPSMGDLAALKILYLQDNKLIGTLDVIEDLFLTDLNVANNLFSGPIPPNLLKVPHFQKDGTPFNTSIITPPPPAVVPPPPTTTTHRSPPPVTHIPPGSTVPPAPFAPFVPLQLTPPLPSPPLVWSPPSDNGGGSDPWNSVSGQPTLQISPPSGSGSGKFWSTQRIILVICSVAVIVLVSGLCVTLWRCYRNKKYNRYIPEARKDYQRPYFNKPPSQPTTPFMAKVSREPMVKPYDGYGAGDRLYGYPTPPRAEESRRAMPPTSYYNVNVTQKPLQQPPRRFQSNDAAATKRTAHFPPGLNTQSSATVFTVASLQQYTNSFSEEHIIGEGSLGNVYKAVFPHGKFLAVRKLSNTINNTQSDGDFLNLVSNVLKLKRGNILEFLGYCNEYGQRLLVYEYCPNGSLQDALHLDRKLNKKLTWNVRMNIALGAAKALQFLHEVCQPPVVHQNFKSSKVLLDGKLSVRVADSGLAYMLPPRPTSQMAGYAAPEIEYGSYTCQSDVYSLGVVMLELLTGSRPFDRTRRRDQTLAQWAIPRLHDIDALTRMADPSLHGAYSVKSLSRFADIISRSLQMEPGFRPPVSEIVQDLQRMI